Clear aligners are a popular alternative to traditional braces for people who want a discreet way to straighten their teeth. They are removable, comfortable, and virtually invisible.
Many patients find aligners appealing because they allow more flexibility in daily routines like eating, brushing, and flossing. Their growing popularity reflects the demand for convenient orthodontic options.
However, like all orthodontic devices, clear aligners have potential downsides. During treatment, some patients may experience discomfort, speech changes, or oral hygiene challenges. Infrequent but more significant complications can occur, especially when aligners are not worn as directed or existing dental issues are overlooked.
This guide outlines the common side effects and less frequent risks of clear aligners. It also explains which experiences are expected and which may require professional advice.
Understanding what may arise during treatment helps patients feel prepared, stay consistent, and make decisions with greater clarity and confidence.
- Clear aligners are a popular option for straightening teeth, but patients should understand the potential side effects and limitations before starting treatment.
- Most people experience mild and temporary side effects, such as initial discomfort, slight speech changes, or changes in saliva flow.
- More serious issues, like gum irritation or plaque buildup, are less common and often linked to poor hygiene or ill-fitting trays.
- Patient compliance is crucial, as wearing aligners for fewer than 20–22 hours daily can affect progress and lead to unsatisfactory results.
- Clear aligners may not be suitable for complex orthodontic issues, certain bite problems, or individuals with active dental conditions.
- Regular check-ups allow dental professionals to monitor progress, adjust the treatment plan, and offer support with hygiene and comfort.
- After completing the aligner process, a post-treatment retention phase helps maintain alignment and reduce the risk of teeth shifting.
Common Side Effects vs. True Risks
Clear aligner treatment is generally considered safe, but some side effects may occur—particularly in the early stages of orthodontic treatment.
Common, temporary side effects include:
- Initial discomfort:
This involves a mild, dull ache or tenderness as the aligners exert pressure and shift the teeth into proper alignment. The sensation usually lessens after the first few days of wear. - Speech changes:
A temporary lisp may develop as the tongue adjusts to the aligners’ presence. This usually improves within a short period of consistent wear. - Increased salivation or dry mouth:
The mouth may respond to aligners by producing more saliva or, in some cases, less. This imbalance is often temporary and settles with continued use.
These side effects are expected and generally short-lived. They reflect how the body naturally adapts to a new orthodontic appliance.
Less common but essential risks of clear aligners may include:
- Poor fit or rubbing:
Aligners that don’t sit properly may irritate the cheeks, lips, or gum line. Ongoing discomfort should be reported to your dental provider for review or adjustment. - Plaque buildup:
If aligners are worn without proper cleaning routines, food particles and bacteria can become trapped, leading to an increased risk of tooth decay or gum irritation. - Persistent dry mouth:
In rare cases, dry mouth may continue throughout treatment. Ongoing dryness should be addressed during check-ups, as it can contribute to bad breath or other oral health concerns.
Understanding the difference between expected side effects and potential complications helps dental patients know when to seek advice and when to stay the course.
Clear aligners are removable, allowing easier brushing and flossing than traditional braces. However, maintaining good oral hygiene is still crucial for successful outcomes and a comfortable treatment experience.
Potential Oral Health Complications

In most cases, clear aligner treatment is a highly effective method for straightening teeth. However, a small number of orthodontic patients may experience oral health complications during the treatment process.
These potential complications may include:
- Tooth root resorption:
This occurs when the roots encounter friction during movement causing abrasion and shorten slightly. It is usually minor and often detected during routine X-rays. - Gum irritation or recession:
Ill-fitting aligners or poor oral hygiene may lead to localised gum issues. Regular check-ups help detect early signs of irritation. - Tooth decay:
If aligners are worn without proper cleaning, trapped food particles can increase the risk of decay and bad breath. - Temporary bite changes:
As teeth shift, some patients may notice changes in bite alignment. These typically adjust with treatment progress. - Allergic reaction to aligner material:
Although rare, some individuals may experience mild sensitivity or irritation linked to the plastic used in aligners.
While these issues are uncommon, they may arise more often in patients with existing dental problems or poor oral hygiene habits. A custom treatment plan and regular dental reviews are essential to monitor alignment and address developing concerns.
Regular dental check-ups, good oral hygiene, and proper cleaning and 3help reduce the risk of complications. These habits are crucial for maintaining good oral health throughout the aligner journey.
Treatment Compliance Challenges
Clear aligners are designed to exert gentle pressure on teeth to move them into the desired position. However, their success relies on consistent wear by the patient.
Unlike traditional metal braces or lingual braces, aligners can be removed. While this adds flexibility, it also requires a strong commitment from orthodontic patients.
Noncompliance may lead to:
- Slower treatment progress:
Skipping wear time can delay the movement of misaligned teeth and extend the overall treatment process. - Misalignment issues:
Inconsistent use may cause teeth to shift unexpectedly, leading to new gaps, overlapping, or difficulty achieving proper alignment. - Increased discomfort:
Re-inserting aligners after extended breaks can add pressure, sensitivity, or gum irritation or Ill-fitting trays. - Unfavourable results:
Incomplete wear may prevent patients from achieving a straight smile or the intended outcome of their custom treatment plan.
Most patients are advised to wear their aligners for 20 to 22 hours per day. This includes wearing them during sleep and only removing them for eating, drinking (except water), brushing, and flossing.
If aligners are lost or damaged:
- Contact your dentist:
Prompt advice will help avoid setbacks in your treatment. - Do not skip days:
Wearing the wrong aligner or skipping steps may affect tooth movement. - Follow professional instructions:
You may need to wear a previous aligner or wait for a replacement before continuing.
Clear aligner therapy is a convenient and discreet alternative to traditional treatment methods. However, achieving the desired results requires responsibility, consistency, and proper care throughout the journey.
Limitations and Contraindications
Invisalign treatment offers many advantages but is not appropriate for every situation. Some dental conditions or orthodontic issues may require different approaches.
A professional assessment helps determine whether removable aligners are suitable or if alternatives like conventional or ceramic braces may be more appropriate.
Clear aligners may not be suitable in the following situations:
- Severe rotations or complex malocclusion:
Aligners may not exert enough pressure to move teeth with more advanced alignment needs. - Significant bite concerns:
Deep overbites, open bites, or underbites may respond better to non-removable devices, such as metal braces or tooth-coloured brackets. - Existing dental concerns:
Tooth decay, gum inflammation, or reduced bone support can increase the risk of irritation, movement issues, or discomfort. - Younger patients with developing jaws:
Children who have not yet reached certain growth stages may benefit more from other orthodontic devices. - Difficulty maintaining oral hygiene:
If aligners are not removed for meals or proper cleaning, plaque buildup, staining, or swelling along the gum line can occur.
These limitations highlight the importance of personalised planning and regular dental check-ups during treatment.
Clear aligners remain attractive for many patients due to their virtually invisible design and smooth form. Understanding their limitations helps dental patients make confident decisions about their care.
Minimising Risks Through Professional Care
The risks of clear aligners can be reduced through proper screening, consistent monitoring, and care that continues after the final aligner is worn.
Clear aligner treatment begins with a detailed assessment to identify oral health conditions that may affect the process or influence outcomes.
During the initial evaluation, dental professionals may:
- Perform a full-mouth examination to check for gum disease, misalignment, or any structural issues that may complicate treatment.
- Digital scans or X-rays can assess bone support and the position of the roots, which helps guide effective tooth movement.
- Review medical and dental history to identify allergies, sensitivities, or habits that could interfere with aligner wear.
These assessments help determine whether clear aligners are suitable or if other options, such as conventional braces or ceramic brackets, may be more appropriate.
Ongoing appointments during treatment may be used to:
- Track the progress of the treatment and confirm that the aligners are functioning as intended.
- Check for irritation, plaque buildup, or other potential downsides before they develop into more complex problems.
- Provide oral hygiene tips, including how to floss daily, rinse properly, and keep the mouth clean.
After completing aligner wear, a personalised retention plan is often used to help maintain proper alignment and reduce the risk of future shifting.
Regular check-ups, clear communication, and consistent care contribute to a smoother experience and support long-term results.
Final Thoughts
Clear aligners are a convenient and effective option for straightening teeth, but like any orthodontic approach, they carry some risks. These may include discomfort, oral hygiene challenges, or complications related to compliance or existing dental conditions.
Most patients experience only mild, temporary side effects that subside early in treatment. More significant risks are uncommon and can often be reduced with proper care and regular monitoring.
A professional assessment is an important first step for those considering aligners treatment. At Darch Dental Centre, our team offers personalised guidance to help determine if clear aligners are right for your needs.
If you’re considering improving your smile, booking a consultation can provide clarity and confidence before proceeding with the next steps.